Publications for All Faculty
Concentration-driven growth of model protocell membranes.
Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany.
The LRR and RING Domain Protein LRSAM1 Is an E3 Ligase Crucial for Ubiquitin-Dependent Autophagy of Intracellular Salmonella Typhimurium.
Concentration-driven growth of model protocell membranes.
Stem Cell Signaling in Immunity and Development.
Measurement of Phagocytosis, Phagosome Acidification, and Intracellular Killing of Staphylococcus aureus.
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
Combination of Radiation and Burn Injury Alters [18F] 2-Fluoro-2-Deoxy-D-Glucose Uptake in Mice.
A high-content imaging workflow to study Grb2 signaling complexes by expression cloning.
A High-content Imaging Workflow to Study Grb2 Signaling Complexes by Expression Cloning.
Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks.
Common alleles that influence autophagy and the risk for inflammatory bowel disease.
Imaging C-Fos Gene Expression in Burns Using Lipid Coated Spion Nanoparticles.
Engineering Designer Transcription Activator--Like Effector Nucleases (TALENs) by REAL or REAL-Fast Assembly.
The Two-Component Sensor KinB Acts as a Phosphatase to Regulate Pseudomonas aeruginosa Virulence.
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment.
Bacille Calmette-Guerin induces NOD2-dependent nonspecific protection from reinfection via epigenetic reprogramming of monocytes.
Essential cell autonomous role for interferon regulatory factor 1 in interferon-?-mediated inhibition of norovirus replication in macrophages.
Evaluation of OPEN Zinc Finger Nucleases for Direct Gene Targeting of the ROSA26 Locus in Mouse Embryos.
Measuring the cost of care for children with acute burn injury.
Impact of hand burns on health-related quality of life in children younger than 5 years.
The American Burn Association/Shriners Hospitals for Children Burn Outcomes Program: A progress report at 15 years.
Previous burn injury predisposes mice to lipopolysaccharide-induced changes in glucose metabolism.
Safety and dosing of bevacizumab (avastin) for the treatment of recurrent respiratory papillomatosis.
Complexity in Differential Peptide-Receptor Signaling: Response to Segonzac et al. and Mueller et al. Commentaries.
FLS2-Mediated Responses to Ax21-Derived Peptides: Response to the Mueller et al. Commentary.
p40phox Expression Regulates Neutrophil Recruitment and Function during the Resolution Phase of Intestinal Inflammation.
Multicomponent assembly of proposed DNA precursors in water.
Enhanced Tim3 Activity Improves Survival after Influenza Infection.
Enhanced Tim3 activity improves survival after influenza infection.
Candida albicans Infection Affords Protection against Reinfection via Functional Reprogramming of Monocytes.
New insights into siRNA amplification and RNAi.
A synthetic biology framework for programming eukaryotic transcription functions.
Multicomponent assembly of proposed DNA precursors in water.
Gram-Negative Bacterial Infection in Thigh Abscess Can Migrate to Distant Burn Depending on Burn Depth.
Genome-Wide Identification of Pseudomonas aeruginosa Virulence-Related Genes Using a Caenorhabditis elegans Infection Model.
Genes Involved in the Evolution of Herbivory By A Leaf-Mining, Drosophilid Fly.
TRIF Licenses Caspase-11-Dependent NLRP3 Inflammasome Activation by Gram-Negative Bacteria.
Induction of cytoprotective pathways is central to the extension of lifespan conferred by multiple longevity pathways.
Eradication of bacterial persisters with antibiotic-generated hydroxyl radicals.
EGL-9 Controls C. elegans Host Defense Specificity through Prolyl Hydroxylation-Dependent and -Independent HIF-1 Pathways.
Perception of volatiles produced by UVC-irradiated plants alters the response to viral infection in naïve neighboring plants.
Case 23-2012.
Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.
Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.
Helminth Infection Impairs Autophagy-Mediated Killing of Bacterial Enteropathogens by Macrophages.
MUT-16 promotes formation of perinuclear Mutator foci required for RNA silencing in the C. elegans germline.
Stimulation of Host Immune Defenses by a Small Molecule Protects C. elegans from Bacterial Infection.
A framework for human microbiome research.
Structure, function and diversity of the healthy human microbiome.
Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs.
Photochemically driven redox chemistry induces protocell membrane pearling and division.
Clinical review. Comparative effectiveness of drug treatments to prevent fragility fractures: a systematic review and network meta-analysis.
Cytokinin signaling networks
An interview with Jen Sheen.
Improved Somatic Mutagenesis in Zebrafish Using Transcription Activator-Like Effector Nucleases (TALENs).
Transient expression assays for quantifying signaling output.
Identification of novel inhibitors of M. tuberculosis growth using whole cell based high-throughput screening.
Penetration Resistance: PKR's Other Talent.
In vitro selection of functional lantipeptides.
In vivo molecular imaging of murine embryonic stem cells delivered to a burn wound surface via Integra® scaffolding.
The Caenorhabditis elegans RDE-10/RDE-11 Complex Regulates RNAi by Promoting Secondary siRNA Amplification.
An image analysis toolbox for high-throughput C. elegans assays.
PIWI Associated siRNAs and piRNAs Specifically Require the Caenorhabditis elegans HEN1 Ortholog henn-1.
Establishment and characterization of a novel chordoma cell line: CH22.
FLASH assembly of TALENs for high-throughput genome editing.
Regulation of monocyte functional heterogeneity by miR-146a and Relb.
RNA signatures allow rapid identification of pathogens and antibiotic susceptibilities.
Patterns of Care at End of Life in Children With Advanced Heart Disease.
Inactivation of Conserved C. elegans Genes Engages Pathogen- and Xenobiotic-Associated Defenses.
Host Translational Inhibition by Pseudomonas aeruginosa Exotoxin A Triggers an Immune Response in Caenorhabditis elegans.
Autophagy and the immune system.
The changing pattern and implications of multiple organ failure after blunt injury with hemorrhagic shock*
Nondegradative Role of Atg5-Atg12/ Atg16L1 Autophagy Protein Complex in Antiviral Activity of Interferon Gamma.
Guidelines for the use and interpretation of assays for monitoring autophagy.
Targeted parallel sequencing of large genetically-defined genomic regions for identifying mutations in Arabidopsis.
Benchmarking Outcomes in the Critically Injured Trauma Patient and the Effect of Implementing Standard Operating Procedures.
Clinical review. Risk factors for low bone mass-related fractures in men: a systematic review and meta-analysis.
In Vitro Selection of Highly Modified Cyclic Peptides That Act as Tight Binding Inhibitors.
Apoptotic cells can deliver chemotherapeutics to engulfing macrophages and suppress inflammatory cytokine production.
Integration of architectural and cytologic driven image algorithms for prostate adenocarcinoma identification.
DNA purification from multiple sources in plant research with homemade silica resins.
Repression of Germline RNAi Pathways in Somatic Cells by Retinoblastoma Pathway Chromatin Complexes.
The mevalonate pathway regulates microRNA activity in Caenorhabditis elegans.
In Vivo Molecular Imaging of Murine Embryonic Stem Cells Delivered to a Burn Wound Surface via Integra® Scaffolding.
ONCOGENIC KRAS REGULATES BMP4 EXPRESSION IN COLON CANCER CELL LINES.
Engineered zinc finger nickases induce homology-directed repair with reduced mutagenic effects.
A Peroxidase-Dependent Apoplastic Oxidative Burst in Cultured Arabidopsis Cells Functions in MAMP-Elicited Defense.
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.
Activated ribonucleotides undergo a sugar pucker switch upon binding to a single-stranded RNA template.
Severe injury is associated with insulin resistance, endoplasmic reticulum stress response, and unfolded protein response.
Attempts to define life do not help to understand the origin of life.
Survival of children with burn injuries.
Thermal Injury Activates eEF2k-Dependent eEF2 Pathway in Pediatric Patients.
Tribbles 2 (Trib2) is a novel regulator of toll-like receptor 5 signaling.
HIV-1 Nef mobilizes lipid rafts in macrophages through a pathway that competes with ABCA1-dependent cholesterol efflux.
Genome-wide siRNA screen for mediators of NF-?B activation.
The apoplastic oxidative burst peroxidase in Arabidopsis is a major component of pattern-triggered immunity.
Immune defense mechanisms in the Caenorhabditis elegans intestinal epithelium.
The neuroimmune guidance cue netrin-1 promotes atherosclerosis by inhibiting the emigration of macrophages from plaques.
Incidence of Catheter-Associated Bloodstream Infection After Introduction of Minocycline and Rifampin Antimicrobial-Coated Catheters in a Pediatric Burn Population.
STAT6 phosphorylation inhibitors block eotaxin-3 secretion in bronchial epithelial cells.
SILAM for quantitative proteomics of liver Akt1/PKB? after burn injury.
Autophagy suppresses interleukin-1? (IL-1?) signaling by activation of p62 degradation via lysosomal and proteasomal pathways.
Resuscitation-promoting factors are required for ?-lactam tolerance and the permeability barrier in Mycobacterium tuberculosis.
Rapamycin and glucose-target of rapamycin (TOR) protein signaling in plants.
The Creating an Optimal Warfarin Nomogram (CROWN) Study.
Systematics-guided bioprospecting for bioactive microbial natural products.
PrimerBank: a PCR primer database for quantitative gene expression analysis, 2012 update.
Down-regulation of glutatione S-transferase ? 4 (hGSTA4) in the muscle of thermally injured patients is indicative of susceptibility to bacterial infection.
Genome-wide expression profiling implicates a MAST3-regulated gene set in colonic mucosal inflammation of ulcerative colitis patients.
Control of NOD2 and Rip2-dependent innate immune activation by GEF-H1.
