Publications for All Faculty

Sort by:
Reset
Ferrari S, Plotnikova JM, De Lorenzo G, Ausubel FM

Arabidopsis local resistance to Botrytis cinerea involves salicylic acid and camalexin and requires EDS4 and PAD2, but not SID2, EDS5 or PAD4.

Plant J. 2003;35(2):193-205 - PMID: 12848825 - DOI: 10.1046/j.1365-313x.2003.01794.x
Vaish NK, Larralde R, Fraley AW, Szostak JW, McLaughlin LW

A novel, modification-dependent ATP-binding aptamer selected from an RNA library incorporating a cationic functionality.

Biochemistry. 2003;42(29):8842-51 - PMID: 12873145 - DOI: 10.1021/bi027354i
Pasquinelli AE, McCoy A, Jiménez E, Saló E, Ruvkun G, Martindale MQ, Baguñà J

Expression of the 22 nucleotide let-7 heterochronic RNA throughout the Metazoa: a role in life history evolution?

Evol Dev. 2003;5(4):372-8 - PMID: 12823453 - DOI: 10.1046/j.1525-142x.2003.03044.x
El Khoury JB, Moore KJ, Means TK, Leung J, Terada K, Toft M, Freeman MW, Luster AD

CD36 mediates the innate host response to beta-amyloid.

J Exp Med. 2003;197(12):1657-66 - PMID: 12796468 - PMCID: PMC2193948 - DOI: 10.1084/jem.20021546
Garsin DA, Villanueva JM, Begun J, Kim DH, Sifri CD, Calderwood SB, Ruvkun G, Ausubel FM

Long-lived C. elegans daf-2 mutants are resistant to bacterial pathogens.

Science. 2003;300(5627):1921 - PMID: 12817143 - DOI: 10.1126/science.1080147
Lowe CJ, Wu M, Salic A, Evans L, Lander E, Stange-Thomann N, Gruber CE, Gerhart J, Kirschner M

Anteroposterior patterning in hemichordates and the origins of the chordate nervous system.

Cell. 2003;113(7):853-65 - PMID: 12837244 - DOI: 10.1016/s0092-8674(03)00469-0
Mylonakis E, Ausubel FM, Tang RJ, Calderwood SB

The art of serendipity: killing of Caenorhabditis elegans by human pathogens as a model of bacterial and fungal pathogenesis.

Expert Rev Anti Infect Ther. 2003;1(1):167-73 - PMID: 15482109 - DOI: 10.1586/14787210.1.1.167
Garsin DA, Villanueva JM, Begun J, Kim DH, Sifri CD, Calderwood SB, Ruvkun G, Ausubel FM

Long-lived C. elegans daf-2 mutants are resistant to bacterial pathogens.

Science. 2003;300(5627):1921 - PMID: 12817143 - DOI: 10.1126/science.1080147
Szostak JW

Functional information: Molecular messages.

Nature. 2003;423(6941):689 - PMID: 12802312 - DOI: 10.1038/423689a
Brown E, McKee T, diTomaso E, Pluen A, Seed B, Boucher Y, Jain RK

Dynamic imaging of collagen and its modulation in tumors in vivo using second-harmonic generation.

Nat Med. 2003;9(6):796-800 - PMID: 12754503 - DOI: 10.1038/nm879
Wang X, Seed B

Selection of oligonucleotide probes for protein coding sequences.

Bioinformatics. 2003;19(7):796-802 - PMID: 12724288 - DOI: 10.1093/bioinformatics/btg086
Shito M, Tilles AW, Tompkins RG, Yarmush ML, Toner M

Efficacy of an extracorporeal flat-plate bioartificial liver in treating fulminant hepatic failure.

J Surg Res. 2003;111(1):53-62 - PMID: 12842448 - DOI: 10.1016/s0022-4804(03)00048-9
Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J

Computational and experimental identification of C. elegans microRNAs.

Mol Cell. 2003;11(5):1253-63 - PMID: 12769849 - DOI: 10.1016/s1097-2765(03)00153-9
Miyata S, Casey M, Frank DW, Ausubel FM, Drenkard E

Use of the Galleria mellonella caterpillar as a model host to study the role of the type III secretion system in Pseudomonas aeruginosa pathogenesis.

Infect Immun. 2003;71(5):2404-13 - PMID: 12704110 - PMCID: PMC153283 - DOI: 10.1128/iai.71.5.2404-2413.2003
Lee SS, Kennedy S, Tolonen AC, Ruvkun G

DAF-16 target genes that control C. elegans life-span and metabolism.

Science. 2003;300(5619):644-7 - PMID: 12690206 - DOI: 10.1126/science.1083614
Huang Z, Szostak JW

Selective labeling and detection of specific RNAs in an RNA mixture.

Anal Biochem. 2003;315(1):129-33 - PMID: 12672421 - DOI: 10.1016/s0003-2697(02)00701-7
Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, Jaffe D, FitzHugh W, Ma LJ, Smirnov S, Purcell S, Rehman B, Elkins T, Engels R, Wang S, Nielsen CB, Butler J, Endrizzi M, Qui D, Ianakiev P, Bell-Pedersen D, Nelson MA, Werner-Washburne M, Selitrennikoff CP, Kinsey JA, Braun EL, Zelter A, Schulte U, Kothe GO, Jedd G, Mewes W, Staben C, Marcotte E, Greenberg D, Roy A, Foley K, Naylor J, Stange-Thomann N, Barrett R, Gnerre S, Kamal M, Kamvysselis M, Mauceli E, Bielke C, Rudd S, Frishman D, Krystofova S, Rasmussen C, Metzenberg RL, Perkins DD, Kroken S, Cogoni C, Macino G, Catcheside D, Li W, Pratt RJ, Osmani SA, DeSouza CP, Glass L, Orbach MJ, Berglund JA, Voelker R, Yarden O, Plamann M, Seiler S, Dunlap J, Radford A, Aramayo R, Natvig DO, Alex LA, Mannhaupt G, Ebbole DJ, Freitag M, Paulsen I, Sachs MS, Lander ES, Nusbaum C, Birren B

The genome sequence of the filamentous fungus Neurospora crassa.

Nature. 2003;422(6934):859-68 - PMID: 12712197 - DOI: 10.1038/nature01554
Moore B, Zhou L, Rolland F, Hall Q, Cheng WH, Liu YX, Hwang I, Jones T, Sheen J

Role of the Arabidopsis glucose sensor HXK1 in nutrient, light, and hormonal signaling.

Science. 2003;300(5617):332-6 - PMID: 12690200 - DOI: 10.1126/science.1080585
Sifri CD, Begun J, Ausubel FM, Calderwood SB

Caenorhabditis elegans as a model host for Staphylococcus aureus pathogenesis.

Infect Immun. 2003;71(4):2208-17 - PMID: 12654843 - PMCID: PMC152095 - DOI: 10.1128/iai.71.4.2208-2217.2003
Tilles AW, Berthiaume F, Yarmush ML, Tompkins RG, Toner M

Bioengineering of liver assist devices.

J Hepatobiliary Pancreat Surg. 2003;9(6):686-96 - PMID: 12658402 - DOI: 10.1007/s005340200095
Li W, Kennedy SG, Ruvkun G

daf-28 encodes a C. elegans insulin superfamily member that is regulated by environmental cues and acts in the DAF-2 signaling pathway.

Genes Dev. 2003;17(7):844-58 - PMID: 12654727 - PMCID: PMC196030 - DOI: 10.1101/gad.1066503
Yang Y, Seed B

Site-specific gene targeting in mouse embryonic stem cells with intact bacterial artificial chromosomes.

Nat Biotechnol. 2003;21(4):447-51 - PMID: 12627171 - DOI: 10.1038/nbt803
Ambros V, Bartel B, Bartel DP, Burge CB, Carrington JC, Chen X, Dreyfuss G, Eddy SR, Griffiths-Jones S, Marshall M, Matzke M, Ruvkun G, Tuschl T

A uniform system for microRNA annotation.

RNA. 2003;9(3):277-9 - PMID: 12592000 - PMCID: PMC1370393 - DOI: 10.1261/rna.2183803
Xu Y, Stange-Thomann N, Weber G, Bo R, Dodge S, David RG, Foley K, Beheshti J, Harris NL, Birren B, Lander ES, Meyerson M

Pathogen discovery from human tissue by sequence-based computational subtraction.

Genomics. 2003;81(3):329-35 - PMID: 12659816 - DOI: 10.1016/s0888-7543(02)00043-5
León P, Sheen J

Sugar and hormone connections.

Trends Plant Sci. 2003;8(3):110-6 - PMID: 12663220 - DOI: 10.1016/S1360-1385(03)00011-6
Total: 2473