Publications for All Faculty

Sort by:
Reset

Ichida JK, Zou K, Horhota A, Yu B, McLaughlin LW, Szostak JW

An in vitro selection system for TNA.
J Am Chem Soc. 2005;127(9):2802-3 - PMID: 15740086 - PMCID: PMC5072288 - DOI: 10.1021/ja045364w

Bais HP, Prithiviraj B, Jha AK, Ausubel FM, Vivanco JM

Mediation of pathogen resistance by exudation of antimicrobials from roots.
Nature. 2005;434(7030):217-21 - PMID: 15759001 - DOI: 10.1038/nature03356

Sifri CD, Begun J, Ausubel FM

The worm has turned--microbial virulence modeled in Caenorhabditis elegans.
Trends Microbiol. 2005;13(3):119-27 - PMID: 15737730 - DOI: 10.1016/j.tim.2005.01.003

Yokoyama T, Banta S, Berthiaume F, Nagrath D, Tompkins RG, Yarmush ML

Evolution of intrahepatic carbon, nitrogen, and energy metabolism in a D-galactosamine-induced rat liver failure model.
Metab Eng. 2005;7(2):88-103 - PMID: 15781418 - DOI: 10.1016/j.ymben.2004.09.003

Chang JH, Urbach JM, Law TF, Arnold LW, Hu A, Gombar S, Grant SR, Ausubel FM, Dangl JL

A high-throughput, near-saturating screen for type III effector genes from Pseudomonas syringae.
Proc Natl Acad Sci U S A. 2005;102(7):2549-54 - PMID: 15701698 - PMCID: PMC549004 - DOI: 10.1073/pnas.0409660102

Hung DT, Mekalanos JJ

Bile acids induce cholera toxin expression in Vibrio cholerae in a ToxT-independent manner.
Proc Natl Acad Sci U S A. 2005;102(8):3028-33 - PMID: 15699331 - PMCID: PMC549475 - DOI: 10.1073/pnas.0409559102

Rolland F, Sheen J

Sugar sensing and signalling networks in plants.
Biochem Soc Trans. 2005;33(Pt 1):269-71 - PMID: 15667323 - DOI: 10.1042/BST0330269

Begun J, Sifri CD, Goldman S, Calderwood SB, Ausubel FM

Staphylococcus aureus virulence factors identified by using a high-throughput Caenorhabditis elegans-killing model.
Infect Immun. 2005;73(2):872-7 - PMID: 15664928 - PMCID: PMC547013 - DOI: 10.1128/IAI.73.2.872-877.2005

Kim DH, Ausubel FM

Evolutionary perspectives on innate immunity from the study of Caenorhabditis elegans.
Curr Opin Immunol. 2005;17(1):4-10 - PMID: 15653303 - DOI: 10.1016/j.coi.2004.11.007

Qian WJ, Jacobs JM, Camp DG, Monroe ME, Moore RJ, Gritsenko MA, Calvano SE, Lowry SF, Xiao W, Moldawer LL, Davis RW, Tompkins RG, Smith RD

Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry.
Proteomics. 2005;5(2):572-84 - PMID: 15627965 - PMCID: PMC1781926 - DOI: 10.1002/pmic.200400942

Lee ML, Gray RJ, Björkbacka H, Freeman MW

Generalized rank tests for replicated microarray data.
Stat Appl Genet Mol Biol. 2005;4:Article3 - PMID: 16646848 - DOI: 10.2202/1544-6115.1093

Cui J, Bahrami AK, Pringle EG, Hernandez-Guzman G, Bender CL, Pierce NE, Ausubel FM

Pseudomonas syringae manipulates systemic plant defenses against pathogens and herbivores.
Proc Natl Acad Sci U S A. 2005;102(5):1791-6 - PMID: 15657122 - PMCID: PMC547856 - DOI: 10.1073/pnas.0409450102

Lopez-Ilasaca MA, Bernabe-Ortiz JC, Na SY, Dzau VJ, Xavier RJ

Bioluminescence resonance energy transfer identify scaffold protein CNK1 interactions in intact cells.
FEBS Lett. 2005;579(3):648-54 - PMID: 15670823 - DOI: 10.1016/j.febslet.2004.12.039

Sosef MN, Baust JM, Sugimachi K, Fowler A, Tompkins RG, Toner M

Cryopreservation of isolated primary rat hepatocytes: enhanced survival and long-term hepatospecific function.
Ann Surg. 2005;241(1):125-33 - PMID: 15622000 - PMCID: PMC1356855 - DOI: 10.1097/01.sla.0000149303.48692.0f

Ishiguro K, Cao Z, Ilasca ML, Ando T, Xavier R

Wave2 activates serum response element via its VCA region and functions downstream of Rac.
Exp Cell Res. 2004;301(2):331-7 - PMID: 15530867 - DOI: 10.1016/j.yexcr.2004.09.003

Hanczyc MM, Szostak JW

Replicating vesicles as models of primitive cell growth and division.
Curr Opin Chem Biol. 2004;8(6):660-4 - PMID: 15556412 - DOI: 10.1016/j.cbpa.2004.10.002

Murthy SK, Sin A, Tompkins RG, Toner M

Effect of flow and surface conditions on human lymphocyte isolation using microfluidic chambers.
Langmuir. 2004;20(26):11649-55 - PMID: 15595794 - DOI: 10.1021/la048047b

Kim WS, Fitzgerald ML, Kang K, Okuhira K, Bell SA, Manning JJ, Koehn SL, Lu N, Moore KJ, Freeman MW

Abca7 null mice retain normal macrophage phosphatidylcholine and cholesterol efflux activity despite alterations in adipose mass and serum cholesterol levels.
J Biol Chem. 2005;280(5):3989-95 - PMID: 15550377 - DOI: 10.1074/jbc.M412602200

Ricci R, Sumara G, Sumara I, Rozenberg I, Kurrer M, Akhmedov A, Hersberger M, Eriksson U, Eberli FR, Becher B, Borén J, Chen M, Cybulsky MI, Moore KJ, Freeman MW, Wagner EF, Matter CM, Lüscher TF

Requirement of JNK2 for scavenger receptor A-mediated foam cell formation in atherogenesis.
Science. 2004;306(5701):1558-61 - PMID: 15567863 - DOI: 10.1126/science.1101909

Garsin DA, Urbach J, Huguet-Tapia JC, Peters JE, Ausubel FM

Construction of an Enterococcus faecalis Tn917-mediated-gene-disruption library offers insight into Tn917 insertion patterns.
J Bacteriol. 2004;186(21):7280-9 - PMID: 15489440 - PMCID: PMC523214 - DOI: 10.1128/JB.186.21.7280-7289.2004

Rojo E, Martín R, Carter C, Zouhar J, Pan S, Plotnikova J, Jin H, Paneque M, Sánchez-Serrano JJ, Baker B, Ausubel FM, Raikhel NV

VPEgamma exhibits a caspase-like activity that contributes to defense against pathogens.
Curr Biol. 2004;14(21):1897-906 - PMID: 15530390 - DOI: 10.1016/j.cub.2004.09.056

Sethu P, Anahtar M, Moldawer LL, Tompkins RG, Toner M

Continuous flow microfluidic device for rapid erythrocyte lysis.
Anal Chem. 2004;76(21):6247-53 - PMID: 15516115 - DOI: 10.1021/ac049429p

Feezor RJ, Baker HV, Mindrinos M, Hayden D, Tannahill CL, Brownstein BH, Fay A, MacMillan S, Laramie J, Xiao W, Moldawer LL, Cobb JP, Laudanski K, Miller-Graziano CL, Maier RV, Schoenfeld D, Davis RW, Tompkins RG,

Whole blood and leukocyte RNA isolation for gene expression analyses.
Physiol Genomics. 2004;19(3):247-54 - PMID: 15548831 - DOI: 10.1152/physiolgenomics.00020.2004

Revzin A, Sekine K, Sin A, Tompkins RG, Toner M

Development of a microfabricated cytometry platform for characterization and sorting of individual leukocytes.
Lab Chip. 2005;5(1):30-7 - PMID: 15616737 - DOI: 10.1039/b405557h

Jaillon O, Aury JM, Brunet F, Petit JL, Stange-Thomann N, Mauceli E, Bouneau L, Fischer C, Ozouf-Costaz C, Bernot A, Nicaud S, Jaffe D, Fisher S, Lutfalla G, Dossat C, Segurens B, Dasilva C, Salanoubat M, Levy M, Boudet N, Castellano S, Anthouard V, Jubin C, Castelli V, Katinka M, Vacherie B, Biémont C, Skalli Z, Cattolico L, Poulain J, De Berardinis V, Cruaud C, Duprat S, Brottier P, Coutanceau JP, Gouzy J, Parra G, Lardier G, Chapple C, McKernan KJ, McEwan P, Bosak S, Kellis M, Volff JN, Guigó R, Zody MC, Mesirov J, Lindblad-Toh K, Birren B, Nusbaum C, Kahn D, Robinson-Rechavi M, Laudet V, Schachter V, Quétier F, Saurin W, Scarpelli C, Wincker P, Lander ES, Weissenbach J, Roest Crollius H

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype.
Nature. 2004;431(7011):946-57 - PMID: 15496914 - DOI: 10.1038/nature03025
Total: 2489