Publications for All Faculty

Sort by:

Breger J, Fuchs BB, Aperis G, Moy TI, Ausubel FM, Mylonakis E

Antifungal chemical compounds identified using a C. elegans pathogenicity assay.
PLoS Pathog. 2007;3(2):e18 - PMID: 17274686 - PMCID: PMC1790726 - DOI: 10.1371/journal.ppat.0030018

He P, Shan L, Sheen J

The use of protoplasts to study innate immune responses.
Methods Mol Biol. 2006;354:1-9 - PMID: 17172739 - DOI: 10.1385/1-59259-966-4:1

Mahoney ZX, Sammut B, Xavier RJ, Cunningham J, Go G, Brim KL, Stappenbeck TS, Miner JH, Swat W

Discs-large homolog 1 regulates smooth muscle orientation in the mouse ureter.
Proc Natl Acad Sci U S A. 2006;103(52):19872-7 - PMID: 17172448 - PMCID: PMC1750896 - DOI: 10.1073/pnas.0609326103

Volkman SK, Sabeti PC, DeCaprio D, Neafsey DE, Schaffner SF, Milner DA, Daily JP, Sarr O, Ndiaye D, Ndir O, Mboup S, Duraisingh MT, Lukens A, Derr A, Stange-Thomann N, Waggoner S, Onofrio R, Ziaugra L, Mauceli E, Gnerre S, Jaffe DB, Zainoun J, Wiegand RC, Birren BW, Hartl DL, Galagan JE, Lander ES, Wirth DF

A genome-wide map of diversity in Plasmodium falciparum.
Nat Genet. 2007;39(1):113-9 - PMID: 17159979 - DOI: 10.1038/ng1930

Miletic AV, Graham DB, Montgrain V, Fujikawa K, Kloeppel T, Brim K, Weaver B, Schreiber R, Xavier R, Swat W

Vav proteins control MyD88-dependent oxidative burst.
Blood. 2007;109(8):3360-8 - PMID: 17158234 - PMCID: PMC1852252 - DOI: 10.1182/blood-2006-07-033662

Miletic AV, Graham DB, Montgrain V, Fujikawa K, Kloeppel T, Brim K, Weaver B, Schreiber R, Xavier R, Swat W

Vav proteins control MyD88-dependent oxidative burst.
Blood. 2007;109(8):3360-8 - PMID: 17158234 - PMCID: PMC1852252 - DOI: 10.1182/blood-2006-07-033662

Stuart LM, Boulais J, Charriere GM, Hennessy EJ, Brunet S, Jutras I, Goyette G, Rondeau C, Letarte S, Huang H, Ye P, Morales F, Kocks C, Bader JS, Desjardins M, Ezekowitz RA

A systems biology analysis of the Drosophila phagosome.
Nature. 2007;445(7123):95-101 - PMID: 17151602 - DOI: 10.1038/nature05380

Lewis K, Ausubel FM

Prospects for plant-derived antibacterials.
Nat Biotechnol. 2006;24(12):1504-7 - PMID: 17160050 - DOI: 10.1038/nbt1206-1504

Fitzgerald ML, Xavier R, Haley KJ, Welti R, Goss JL, Brown CE, Zhuang DZ, Bell SA, Lu N, McKee M, Seed B, Freeman MW

ABCA3 inactivation in mice causes respiratory failure, loss of pulmonary surfactant, and depletion of lung phosphatidylglycerol.
J Lipid Res. 2007;48(3):621-32 - PMID: 17142808 - DOI: 10.1194/jlr.M600449-JLR200

Zhang Q, Cao H, Astrakas LG, Mintzopoulos D, Mindrinos MN, Schulz J, Tompkins RG, Rahme LG, Tzika AA

Uncoupling protein 3 expression and intramyocellular lipid accumulation by NMR following local burn trauma.
Int J Mol Med. 2006;18(6):1223-9 - PMID: 17089030

Cheng X, Irimia D, Dixon M, Sekine K, Demirci U, Zamir L, Tompkins RG, Rodriguez W, Toner M

A microfluidic device for practical label-free CD4(+) T cell counting of HIV-infected subjects.
Lab Chip. 2007;7(2):170-8 - PMID: 17268618 - PMCID: PMC4028372 - DOI: 10.1039/b612966h

DeFaria Yeh D, Freeman MW, Meigs JB, Grant RW

Risk factors for coronary artery disease in patients with elevated high-density lipoprotein cholesterol.
Am J Cardiol. 2007;99(1):1-4 - PMID: 17196452 - DOI: 10.1016/j.amjcard.2006.07.053

Shinoda M, Tilles AW, Kobayashi N, Wakabayashi G, Takayanagi A, Totsugawa T, Harada H, Obara H, Suganuma K, Berthiaume F, Shimazu M, Shimizu N, Tanaka N, Kitajima M, Tompkins RG, Toner M, Yarmush ML

A bioartificial liver device secreting interleukin-1 receptor antagonist for the treatment of hepatic failure in rats.
J Surg Res. 2007;137(1):130-40 - PMID: 17081566 - PMCID: PMC3201777 - DOI: 10.1016/j.jss.2006.08.009

Horhota AT, Szostak JW, McLaughlin LW

Glycerol nucleoside triphosphates: synthesis and polymerase substrate activities.
Org Lett. 2006;8(23):5345-7 - PMID: 17078714 - DOI: 10.1021/ol062232u

Cho YH, Yoo SD, Sheen J

Regulatory functions of nuclear hexokinase1 complex in glucose signaling.
Cell. 2006;127(3):579-89 - PMID: 17081979 - DOI: 10.1016/j.cell.2006.09.028

Hayes GD, Frand AR, Ruvkun G

The mir-84 and let-7 paralogous microRNA genes of Caenorhabditis elegans direct the cessation of molting via the conserved nuclear hormone receptors NHR-23 and NHR-25.
Development. 2006;133(23):4631-41 - PMID: 17065234 - DOI: 10.1242/dev.02655

Ishiguro K, Ando T, Goto H, Xavier R

Bcl10 is phosphorylated on Ser138 by Ca2+/calmodulin-dependent protein kinase II.
Mol Immunol. 2007;44(8):2095-100 - PMID: 17052756 - DOI: 10.1016/j.molimm.2006.09.012

Lee DG, Urbach JM, Wu G, Liberati NT, Feinbaum RL, Miyata S, Diggins LT, He J, Saucier M, Déziel E, Friedman L, Li L, Grills G, Montgomery K, Kucherlapati R, Rahme LG, Ausubel FM

Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial.
Genome Biol. 2006;7(10):R90 - PMID: 17038190 - PMCID: PMC1794565 - DOI: 10.1186/gb-2006-7-10-r90

Laudanski K, Miller-Graziano C, Xiao W, Mindrinos MN, Richards DR, De A, Moldawer LL, Maier RV, Bankey P, Baker HV, Brownstein BH, Cobb JP, Calvano SE, Davis RW, Tompkins RG

Cell-specific expression and pathway analyses reveal alterations in trauma-related human T cell and monocyte pathways.
Proc Natl Acad Sci U S A. 2006;103(42):15564-9 - PMID: 17032758 - PMCID: PMC1592643 - DOI: 10.1073/pnas.0607028103

Ball AR, Casadei G, Samosorn S, Bremner JB, Ausubel FM, Moy TI, Lewis K

Conjugating berberine to a multidrug efflux pump inhibitor creates an effective antimicrobial.
ACS Chem Biol. 2006;1(9):594-600 - PMID: 17168555 - DOI: 10.1021/cb600238x

Blackburn EH, Greider CW, Szostak JW

Telomeres and telomerase: the path from maize, Tetrahymena and yeast to human cancer and aging.
Nat Med. 2006;12(10):1133-8 - PMID: 17024208 - DOI: 10.1038/nm1006-1133

Yamamoto-Furusho JK, Barnich N, Xavier R, Hisamatsu T, Podolsky DK

Centaurin beta1 down-regulates nucleotide-binding oligomerization domains 1- and 2-dependent NF-kappaB activation.
J Biol Chem. 2006;281(47):36060-70 - PMID: 17005562 - DOI: 10.1074/jbc.M602383200

Ruvinsky I, Ohler U, Burge CB, Ruvkun G

Detection of broadly expressed neuronal genes in C. elegans.
Dev Biol. 2007;302(2):617-26 - PMID: 17046742 - DOI: 10.1016/j.ydbio.2006.09.014

Troemel ER, Chu SW, Reinke V, Lee SS, Ausubel FM, Kim DH

p38 MAPK regulates expression of immune response genes and contributes to longevity in C. elegans.
PLoS Genet. 2006;2(11):e183 - PMID: 17096597 - PMCID: PMC1635533 - DOI: 10.1371/journal.pgen.0020183

Salehi-Ashtiani K, Lupták A, Litovchick A, Szostak JW

A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene.
Science. 2006;313(5794):1788-92 - PMID: 16990549 - DOI: 10.1126/science.1129308
Total: 2498