Publications for All Faculty

Sort by:
Reset

Goyette P, Lefebvre C, Ng A, Brant SR, Cho JH, Duerr RH, Silverberg MS, Taylor KD, Latiano A, Aumais G, Deslandres C, Jobin G, Annese V, Daly MJ, Xavier RJ, Rioux JD

Gene-centric association mapping of chromosome 3p implicates MST1 in IBD pathogenesis.
Mucosal Immunol. 2008;1(2):131-8 - PMID: 19079170 - PMCID: PMC4550306 - DOI: 10.1038/mi.2007.15

Yagi T, Giallourakis C, Mohanty S, Scheidig C, Shen J, Zheng H, Xavier RJ, Shaw AC

Defective signal transduction in B lymphocytes lacking presenilin proteins.
Proc Natl Acad Sci U S A. 2008;105(3):979-84 - PMID: 18195359 - PMCID: PMC2242696 - DOI: 10.1073/pnas.0707755105

Brass AL, Dykxhoorn DM, Benita Y, Yan N, Engelman A, Xavier RJ, Lieberman J, Elledge SJ

Identification of host proteins required for HIV infection through a functional genomic screen.
Science. 2008;319(5865):921-6 - PMID: 18187620 - DOI: 10.1126/science.1152725

Pierce ML, Weston MD, Fritzsch B, Gabel HW, Ruvkun G, Soukup GA

MicroRNA-183 family conservation and ciliated neurosensory organ expression.
Evol Dev. 2008;10(1):106-13 - PMID: 18184361 - PMCID: PMC2637451 - DOI: 10.1111/j.1525-142X.2007.00217.x

Ip WK, Takahashi K, Moore KJ, Stuart LM, Ezekowitz RA

Mannose-binding lectin enhances Toll-like receptors 2 and 6 signaling from the phagosome.
J Exp Med. 2008;205(1):169-81 - PMID: 18180310 - PMCID: PMC2234382 - DOI: 10.1084/jem.20071164

Huett A, Xavier R

SNPping away at the pathogenesis of Crohn's disease.
Inflamm Bowel Dis. 2008;14(1):136-7 - PMID: 17941076 - DOI: 10.1002/ibd.20306

Apidianakis Y, Mindrinos MN, Xiao W, Tegos GP, Papisov MI, Hamblin MR, Davis RW, Tompkins RG, Rahme LG

Involvement of skeletal muscle gene regulatory network in susceptibility to wound infection following trauma.
PLoS One. 2007;2(12):e1356 - PMID: 18159239 - PMCID: PMC2131783 - DOI: 10.1371/journal.pone.0001356

Isenbarger TA, Finney M, Ríos-Velázquez C, Handelsman J, Ruvkun G

Miniprimer PCR, a new lens for viewing the microbial world.
Appl Environ Microbiol. 2008;74(3):840-9 - PMID: 18083877 - PMCID: PMC2227730 - DOI: 10.1128/AEM.01933-07

Greenhalgh DG, Saffle JR, Holmes JH, Gamelli RL, Palmieri TL, Horton JW, Tompkins RG, Traber DL, Mozingo DW, Deitch EA, Goodwin CW, Herndon DN, Gallagher JJ, Sanford AP, Jeng JC, Ahrenholz DH, Neely AN, O'Mara MS, Wolf SE, Purdue GF, Garner WL, Yowler CJ, Latenser BA,

American Burn Association consensus conference to define sepsis and infection in burns.
J Burn Care Res. 2007;28(6):776-90 - PMID: 17925660 - DOI: 10.1097/BCR.0b013e3181599bc9

Chen Z, Agnew JL, Cohen JD, He P, Shan L, Sheen J, Kunkel BN

Pseudomonas syringae type III effector AvrRpt2 alters Arabidopsis thaliana auxin physiology.
Proc Natl Acad Sci U S A. 2007;104(50):20131-6 - PMID: 18056646 - PMCID: PMC2148434 - DOI: 10.1073/pnas.0704901104

Nagrath S, Sequist LV, Maheswaran S, Bell DW, Irimia D, Ulkus L, Smith MR, Kwak EL, Digumarthy S, Muzikansky A, Ryan P, Balis UJ, Tompkins RG, Haber DA, Toner M

Isolation of rare circulating tumour cells in cancer patients by microchip technology.
Nature. 2007;450(7173):1235-9 - PMID: 18097410 - PMCID: PMC3090667 - DOI: 10.1038/nature06385

Leb VM, Jahn-Schmid B, Schmetterer KG, Kueng HJ, Haiderer D, Neunkirchner A, Fischer GF, Nissler K, Hartl A, Thalhamer J, Bohle B, Seed B, Pickl WF

Molecular and functional analysis of the antigen receptor of Art v 1-specific helper T lymphocytes.
J Allergy Clin Immunol. 2008;121(1):64-71 - PMID: 18037161 - DOI: 10.1016/j.jaci.2007.10.006

Cornu TI, Thibodeau-Beganny S, Guhl E, Alwin S, Eichtinger M, Joung JK, Joung JK, Cathomen T

DNA-binding specificity is a major determinant of the activity and toxicity of zinc-finger nucleases.
Mol Ther. 2008;16(2):352-8 - PMID: 18026168 - DOI: 10.1038/sj.mt.6300357

Parry DH, Xu J, Ruvkun G

A whole-genome RNAi Screen for C. elegans miRNA pathway genes.
Curr Biol. 2007;17(23):2013-22 - PMID: 18023351 - PMCID: PMC2211719 - DOI: 10.1016/j.cub.2007.10.058

Di Carlo D, Irimia D, Tompkins RG, Toner M

Continuous inertial focusing, ordering, and separation of particles in microchannels.
Proc Natl Acad Sci U S A. 2007;104(48):18892-7 - PMID: 18025477 - PMCID: PMC2141878 - DOI: 10.1073/pnas.0704958104

Samuelson AV, Carr CE, Ruvkun G

Gene activities that mediate increased life span of C. elegans insulin-like signaling mutants.
Genes Dev. 2007;21(22):2976-94 - PMID: 18006689 - PMCID: PMC2049198 - DOI: 10.1101/gad.1588907

Drosophila 12 Genomes Consortium, Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artieri CG, Barbash DA, Barker D, Barsanti P, Batterham P, Batzoglou S, Begun D, Bhutkar A, Blanco E, Bosak SA, Bradley RK, Brand AD, Brent MR, Brooks AN, Brown RH, Butlin RK, Caggese C, Calvi BR, Bernardo de Carvalho A, Caspi A, Castrezana S, Celniker SE, Chang JL, Chapple C, Chatterji S, Chinwalla A, Civetta A, Clifton SW, Comeron JM, Costello JC, Coyne JA, Daub J, David RG, Delcher AL, Delehaunty K, Do CB, Ebling H, Edwards K, Eickbush T, Evans JD, Filipski A, Findeiss S, Freyhult E, Fulton L, Fulton R, Garcia AC, Gardiner A, Garfield DA, Garvin BE, Gibson G, Gilbert D, Gnerre S, Godfrey J, Good R, Gotea V, Gravely B, Greenberg AJ, Griffiths-Jones S, Gross S, Guigo R, Gustafson EA, Haerty W, Hahn MW, Halligan DL, Halpern AL, Halter GM, Han MV, Heger A, Hillier L, Hinrichs AS, Holmes I, Hoskins RA, Hubisz MJ, Hultmark D, Huntley MA, Jaffe DB, Jagadeeshan S, Jeck WR, Johnson J, Jones CD, Jordan WC, Karpen GH, Kataoka E, Keightley PD, Kheradpour P, Kirkness EF, Koerich LB, Kristiansen K, Kudrna D, Kulathinal RJ, Kumar S, Kwok R, Lander E, Langley CH, Lapoint R, Lazzaro BP, Lee SJ, Levesque L, Li R, Lin CF, Lin MF, Lindblad-Toh K, Llopart A, Long M, Low L, Lozovsky E, Lu J, Luo M, Machado CA, Makalowski W, Marzo M, Matsuda M, Matzkin L, McAllister B, McBride CS, McKernan B, McKernan K, Mendez-Lago M, Minx P, Mollenhauer MU, Montooth K, Mount SM, Mu X, Myers E, Negre B, Newfeld S, Nielsen R, Noor MA, O'Grady P, Pachter L, Papaceit M, Parisi MJ, Parisi M, Parts L, Pedersen JS, Pesole G, Phillippy AM, Ponting CP, Pop M, Porcelli D, Powell JR, Prohaska S, Pruitt K, Puig M, Quesneville H, Ram KR, Rand D, Rasmussen MD, Reed LK, Reenan R, Reily A, Remington KA, Rieger TT, Ritchie MG, Robin C, Rogers YH, Rohde C, Rozas J, Rubenfield MJ, Ruiz A, Russo S, Salzberg SL, Sanchez-Gracia A, Saranga DJ, Sato H, Schaeffer SW, Schatz MC, Schlenke T, Schwartz R, Segarra C, Singh RS, Sirot L, Sirota M, Sisneros NB, Smith CD, Smith TF, Spieth J, Stage DE, Stark A, Stephan W, Strausberg RL, Strempel S, Sturgill D, Sutton G, Sutton GG, Tao W, Teichmann S, Tobari YN, Tomimura Y, Tsolas JM, Valente VL, Venter E, Venter JC, Vicario S, Vieira FG, Vilella AJ, Villasante A, Walenz B, Wang J, Wasserman M, Watts T, Wilson D, Wilson RK, Wing RA, Wolfner MF, Wong A, Wong GK, Wu CI, Wu G, Yamamoto D, Yang HP, Yang SP, Yorke JA, Yoshida K, Zdobnov E, Zhang P, Zhang Y, Zimin AV, Baldwin J, Abdouelleil A, Abdulkadir J, Abebe A, Abera B, Abreu J, Acer SC, Aftuck L, Alexander A, An P, Anderson E, Anderson S, Arachi H, Azer M, Bachantsang P, Barry A, Bayul T, Berlin A, Bessette D, Bloom T, Blye J, Boguslavskiy L, Bonnet C, Boukhgalter B, Bourzgui I, Brown A, Cahill P, Channer S, Cheshatsang Y, Chuda L, Citroen M, Collymore A, Cooke P, Costello M, D'Aco K, Daza R, De Haan G, DeGray S, DeMaso C, Dhargay N, Dooley K, Dooley E, Doricent M, Dorje P, Dorjee K, Dupes A, Elong R, Falk J, Farina A, Faro S, Ferguson D, Fisher S, Foley CD, Franke A, Friedrich D, Gadbois L, Gearin G, Gearin CR, Giannoukos G, Goode T, Graham J, Grandbois E, Grewal S, Gyaltsen K, Hafez N, Hagos B, Hall J, Henson C, Hollinger A, Honan T, Huard MD, Hughes L, Hurhula B, Husby ME, Kamat A, Kanga B, Kashin S, Khazanovich D, Kisner P, Lance K, Lara M, Lee W, Lennon N, Letendre F, LeVine R, Lipovsky A, Liu X, Liu J, Liu S, Lokyitsang T, Lokyitsang Y, Lubonja R, Lui A, MacDonald P, Magnisalis V, Maru K, Matthews C, McCusker W, McDonough S, Mehta T, Meldrim J, Meneus L, Mihai O, Mihalev A, Mihova T, Mittelman R, Mlenga V, Montmayeur A, Mulrain L, Navidi A, Naylor J, Negash T, Nguyen T, Nguyen N, Nicol R, Norbu C, Norbu N, Novod N, O'Neill B, Osman S, Markiewicz E, Oyono OL, Patti C, Phunkhang P, Pierre F, Priest M, Raghuraman S, Rege F, Reyes R, Rise C, Rogov P, Ross K, Ryan E, Settipalli S, Shea T, Sherpa N, Shi L, Shih D, Sparrow T, Spaulding J, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Strader C, Tesfaye S, Thomson T, Thoulutsang Y, Thoulutsang D, Topham K, Topping I, Tsamla T, Vassiliev H, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Young G, Yu Q, Zembek L, Zhong D, Zimmer A, Zwirko Z, Jaffe DB, Alvarez P, Brockman W, Butler J, Chin C, Gnerre S, Grabherr M, Kleber M, Mauceli E, MacCallum I

Evolution of genes and genomes on the Drosophila phylogeny.
Nature. 2007;450(7167):203-18 - PMID: 17994087 - DOI: 10.1038/nature06341

Müller B, Sheen J

Arabidopsis cytokinin signaling pathway.
Sci STKE. 2007;2007(407):cm5 - PMID: 17925576 - DOI: 10.1126/stke.4072007cm5

Müller B, Sheen J

Cytokinin signaling pathway.
Sci STKE. 2007;2007(407):cm4 - PMID: 17925575 - DOI: 10.1126/stke.4072007cm4

Hartman MC, Josephson K, Lin CW, Szostak JW

An expanded set of amino acid analogs for the ribosomal translation of unnatural peptides.
PLoS One. 2007;2(10):e972 - PMID: 17912351 - PMCID: PMC1989143 - DOI: 10.1371/journal.pone.0000972

Murakami K, Enkhbaatar P, Yu YM, Traber LD, Cox RA, Hawkins HK, Tompkins RG, Herndon D, Traber DL

L-arginine attenuates acute lung injury after smoke inhalation and burn injury in sheep.
Shock. 2007;28(4):477-83 - PMID: 17558346 - DOI: 10.1097/shk.0b013e31804a59bd

Müller B, Sheen J

Advances in cytokinin signaling.
Science. 2007;318(5847):68-9 - PMID: 17916725 - DOI: 10.1126/science.1145461

Shibolet O, Giallourakis C, Rosenberg I, Mueller T, Xavier RJ, Podolsky DK

AKAP13, a RhoA GTPase-specific guanine exchange factor, is a novel regulator of TLR2 signaling.
J Biol Chem. 2007;282(48):35308-17 - PMID: 17878165 - DOI: 10.1074/jbc.M704426200

Cotta-de-Almeida V, Westerberg L, Maillard MH, Onaldi D, Wachtel H, Meelu P, Chung UI, Xavier R, Alt FW, Snapper SB

Wiskott Aldrich syndrome protein (WASP) and N-WASP are critical for T cell development.
Proc Natl Acad Sci U S A. 2007;104(39):15424-9 - PMID: 17878299 - PMCID: PMC2000553 - DOI: 10.1073/pnas.0706881104

Cao Z, Huett A, Kuballa P, Giallourakis C, Xavier RJ

DLG1 is an anchor for the E3 ligase MARCH2 at sites of cell-cell contact.
Cell Signal. 2008;20(1):73-82 - PMID: 17980554 - PMCID: PMC2257480 - DOI: 10.1016/j.cellsig.2007.08.019
Total: 2489